About Protein Docking Server
Protein Docking Server is an internet service that calculates the site, geometry and energy of proteins interacting with proteins. The Protein Docking Server is offered to everyone in the field of molecular modeling from beginners to professionals.
Protein Docking Server is developed and maintained by Virtua Drug Ltd. Free access is provided for academic users without registration using a common workspace. Registration is required in order to get a private workspace. Data storage of the input and output files, high-priority jobs, e-mail and forum support are available upon payment.
The task in molecular docking assignments is to find the best complex geometry. The problem is usually seen as an optimization task where the goal is to minimize the intermolecular interaction energy between the two molecules of interest. Since the possible number of complex geometries is usually very large, different algorithms are used in order to accurately explore the space of possible conformations while decreasing the computational power needed for the docking calculation at the same time.
Protein Docking Server offers an easy way to compute protein-protein interactions in easy steps
Protein Docking Server offers an easy to use graphical interface for: